BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C01SP1|AL428344
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1013 1180 0.0
3x_Contig1737 351 1e-96
>3x_Contig1013
Length = 5070
Score = 1180 bits (595), Expect = 0.0
Identities = 685/713 (96%), Gaps = 2/713 (0%)
Strand = Plus / Minus
Query: 1 gatcttcaattcacctgaatcgattaatctgatcaattcagaagagtaatgttcccattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gatcttcaattcacctgaatcgattaatctgatcaattcagaagagtaatgttcccattc 654
Query: 61 actaggatcggccacgtaggcgaacaattgaggtctcactagcttcaaattcttgggcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 actaggatcggccacgtaggcgaacaattgaggtctcactagcttcaaattcttgggcga 594
Query: 121 caatctgttgattgaaaatggtggaacagcaccagaagcattaccaaaggagacaatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 caatctgttgattgaaaatggtggaacagcaccagaagcattaccaaaggagacaatagt 534
Query: 181 accttttctcttaacaacttgaagagtggtttcaaacgtatccttaccgatagaatcgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 accttttctcttaacaacttgaagagtggtttcaaacgtatccttaccgatagaatcgaa 474
Query: 241 agcggcagcrgcaccttccccatttgtgaattctttaaccttctcgacgatatcgtcttt 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 agcggcagcgacaccttccccatttgtgaattctttaaccttctcgacgatatcgtcttt 414
Query: 301 agtagagttaattaagaactctgcaccatattccttagccaattgcagtttttcatcggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agtagagttaattaagaactctgcaccatattccttagccaattgcagtttttcatcggt 354
Query: 361 agaggcaacggcaatggttctagcacctcttgctttcaacaattgatcaaagatcaaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agaggcaacggcaatggttctagcacctcttgctttcaacaattgatcaaagatcaaccc 294
Query: 421 aacaccacctgcagcagcataaacaaggatgaaatcgcccttctgaacgttataagcctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aacaccacctgcagcagcataaacaaggatgaaatcgcccttctgaacgttataagcctc 234
Query: 481 gtcgatgaaagttaacggggtcaaaccttgaaccaacgaaccagcgatgatttttttcct 540
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 233 gtcgatgaaagtaaacggggtcaaaccttgaaccaacgaaccagcgatga-ttttatcct 175
Query: 541 tctcagcagagatatctttaggtagcttaatcaaatgcccattctgtgggtacttagtga 600
|||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 174 tctcagcagaaatatctttaggtagcttaatcaaatgccccttctgagggtacttagtgt 115
Query: 601 attgagcgaaagtcgatgcagacaagtaggcaactttatcaccgacgttgtacttatcaa 660
||| || | || ||| || ||| |||||| | ||| || | | |||||||||||||||
Sbjct: 114 cttgcgcaacagacgaagccgaccagtaggaaccttactcccagccgttgtacttatcaa 55
Query: 661 cttggtcacctttagcgaccacttcaccaacggcttctctacctaacacataa 713
||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 54 cttggtcacctttcgcgaccacttc-ccaccggctactctacctaacacataa 3
>3x_Contig1737
Length = 17214
Score = 351 bits (177), Expect = 1e-96
Identities = 184/185 (99%), Gaps = 1/185 (0%)
Strand = Plus / Plus
Query: 671 tttagcgaccacttcaccaacggcttctctacctaacacataaggtttttcacttgggta 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttagcgaccacttcaccaacggcttctctacctaacacataaggtttttcacttgggta 60
Query: 731 aatgcctttacggaaatagacttcgatgaagttgataccggcgtatttgttcttgattag 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcctttacggaaatagacttcgatgaagttgataccggcgtatttgttcttgattag 120
Query: 791 aagatcggtggca-cgatcttaggaactgggtaatcttcttcgtactttaacacttctgg 849
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagatcggtggcaccgatcttaggaactgggtaatcttcttcgtactttaacacttctgg 180
Query: 850 gccac 854
|||||
Sbjct: 181 gccac 185
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6272
Number of Sequences: 1807
Number of extensions: 6272
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 2
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)